BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009A03SP1|AL425958
(834 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1409 1573 0.0
>3x_Contig1409
Length = 9404
Score = 1573 bits (791), Expect = 0.0
Identities = 815/823 (99%), Gaps = 2/823 (0%)
Strand = Plus / Minus
Query: 14 tatatgatcagaagcgatctaccacagaacaagggaactttactagcacccaattcagaa 73
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9404 tatatgatcagaagcgatctaccacagaacaagggaactttactagcacccaattcagaa 9345
Query: 74 agaatccgtgaagcggcagctactagacaagaggaaaaaaaagaaacagttagatgtaag 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9344 agaatccgtgaagcggcagctactagacaagaggaaaaaaaagaaacagttagatgtaag 9285
Query: 134 twccgacatgcataaataaagcatttgttttggtaagctgcatcatcacaaagacgcaat 193
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9284 taccgacatgcataaataaagcatttgttttggtaagctgcatcatcacaaagacgcaat 9225
Query: 194 gcaagactttatagcgaggatattgaactcatttttacgttaaatactgctctttaaggt 253
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9224 gcaagactttatagcgaggatattgaactcatttttacgttaaatactgctctttaaggt 9165
Query: 254 agaaacaagtagtcatctgccatctgccacactaaatgagttacgcagaggcgcttgttt 313
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 9164 agaaacaagtagtcatctgccatctgccacactaaatgagtaacgcagaggcgcttgttt 9105
Query: 314 accggcatgatgatgatctgtaaaatatgacttttgcgaggctggagctttcgagcttat 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9104 accggcatgatgatgatctgtaaaatatgacttttgcgaggctggagctttcgagcttat 9045
Query: 374 gagatagaccatacttgttctctatatcgattcagccacacgtcacagcgcas-atttag 432
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 9044 gagatagaccatacttgttctctatatcgattcagccacacgtcacagcgcagaatttag 8985
Query: 433 tcgatcaagaattttttgagcggaagtgatcagacactcaattttcgtcgtaccatctaa 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8984 tcgatcaagaattttttgagcggaagtgatcagacactcaattttcgtcgtaccatctaa 8925
Query: 493 attcttcaagcaatactttgacatcaatatgaagacaacttggtgaccgcmattctgata 552
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 8924 attcttcaagcaatactttgacatcaatatgaagacaacttggtgaccgcaattctgata 8865
Query: 553 g-gccctcattccatagcgttataacggttttatcacttccttaaggattctattttccg 611
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8864 gagccctcattccatagcgttataacggttttatcacttccttaaggattctattttccg 8805
Query: 612 cctaawatatgctttttggagcaatttctcgtctagtagttgtcccagaaaaacaaaccc 671
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8804 cctaaaatatgctttttggagcaatttctcgtctagtagttgtcccagaaaaacaaaccc 8745
Query: 672 ccgaaaaaaaggttccagacctttaatttgtatcattatttccacaatatataataactg 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8744 ccgaaaaaaaggttccagacctttaatttgtatcattatttccacaatatataataactg 8685
Query: 732 ggataacatcaaacattaggaatatggagtttcattccgtgcgaaatacataaacctggt 791
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 8684 ggataacatcaaacattaggaatatggagtttcattccgtgcgacatacataaacctggt 8625
Query: 792 gttcctctgcgataaaaagtgtattcaagggtacttcaatcgg 834
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8624 gttcctctgcgataaaaagtgtattcaagggtacttcaatcgg 8582
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6268
Number of Sequences: 1807
Number of extensions: 6268
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 834
length of database: 10,358,551
effective HSP length: 16
effective length of query: 818
effective length of database: 10,329,639
effective search space: 8449644702
effective search space used: 8449644702
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)